Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msx1P13297 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Msx1P13297 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Gm25318-201ENSMUST00000122554 314 ntBASIC12.82□□□□□ -0.36
Msx1P13297 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.82□□□□□ -0.36
Msx1P13297 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Msx1P13297 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Gm3344-201ENSMUST00000169610 603 ntBASIC12.82□□□□□ -0.36
Msx1P13297 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Msx1P13297 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.82□□□□□ -0.36
Msx1P13297 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.82□□□□□ -0.36
Msx1P13297 Gm27731-201ENSMUST00000185192 107 ntBASIC12.82□□□□□ -0.36
Msx1P13297 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Gm43179-201ENSMUST00000198797 275 ntBASIC12.82□□□□□ -0.36
Msx1P13297 Gm8463-201ENSMUST00000208573 613 ntBASIC12.82□□□□□ -0.36
Msx1P13297 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.82□□□□□ -0.36
Msx1P13297 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msx1P13297 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msx1P13297 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msx1P13297 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Msx1P13297 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Msx1P13297 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Msx1P13297 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx1P13297 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Msx1P13297 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Msx1P13297 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Msx1P13297 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.81□□□□□ -0.36
Msx1P13297 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.81□□□□□ -0.36
Msx1P13297 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.81□□□□□ -0.36
Msx1P13297 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx1P13297 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Msx1P13297 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Msx1P13297 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.81□□□□□ -0.36
Msx1P13297 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Msx1P13297 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.81□□□□□ -0.36
Msx1P13297 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Msx1P13297 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Msx1P13297 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.81□□□□□ -0.36
Msx1P13297 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Msx1P13297 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx1P13297 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx1P13297 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Msx1P13297 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx1P13297 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx1P13297 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx1P13297 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx1P13297 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Msx1P13297 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.8□□□□□ -0.36
Msx1P13297 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.8□□□□□ -0.36
Msx1P13297 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.8□□□□□ -0.36
Msx1P13297 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Msx1P13297 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Msx1P13297 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.8□□□□□ -0.36
Msx1P13297 Mir698-201ENSMUST00000102164 109 ntBASIC12.8□□□□□ -0.36
Msx1P13297 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Msx1P13297 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.8□□□□□ -0.36
Msx1P13297 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Msx1P13297 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx1P13297 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.8□□□□□ -0.36
Msx1P13297 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.8□□□□□ -0.36
Msx1P13297 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.8□□□□□ -0.36
Msx1P13297 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.8□□□□□ -0.36
Msx1P13297 Gm28925-201ENSMUST00000188586 168 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms