Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.13□□□□□ -0.63
Cxcl1P12850 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Gm9229-201ENSMUST00000222777 126 ntBASIC11.13□□□□□ -0.63
Cxcl1P12850 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.13□□□□□ -0.63
Cxcl1P12850 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cxcl1P12850 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cxcl1P12850 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Cxcl1P12850 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl1P12850 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.13□□□□□ -0.63
Cxcl1P12850 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl1P12850 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cxcl1P12850 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cxcl1P12850 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.12□□□□□ -0.63
Cxcl1P12850 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm15393-201ENSMUST00000120499 219 ntBASIC11.12□□□□□ -0.63
Cxcl1P12850 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm10766-202ENSMUST00000194123 606 ntBASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm5425-201ENSMUST00000214125 459 ntBASIC11.12□□□□□ -0.63
Cxcl1P12850 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cxcl1P12850 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.12□□□□□ -0.63
Cxcl1P12850 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl1P12850 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl1P12850 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm24158-201ENSMUST00000175263 71 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Mir7221-201ENSMUST00000184009 72 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm28630-201ENSMUST00000187806 498 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm5264-201ENSMUST00000190584 848 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm43474-201ENSMUST00000196415 774 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm44335-201ENSMUST00000196879 141 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm44297-201ENSMUST00000198304 141 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm44346-201ENSMUST00000198851 141 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm45841-201ENSMUST00000207700 164 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Shd-206ENSMUST00000225145 998 ntBASIC11.11□□□□□ -0.63
Cxcl1P12850 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Cxcl1P12850 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms