Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Fn1P11276 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC10.22□□□□□ -0.77
Fn1P11276 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.22□□□□□ -0.77
Fn1P11276 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Mir181d-201ENSMUST00000102383 72 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Gm23251-201ENSMUST00000103773 110 ntBASIC10.22□□□□□ -0.77
Fn1P11276 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Fn1P11276 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.22□□□□□ -0.77
Fn1P11276 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.22□□□□□ -0.77
Fn1P11276 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Gm5621-201ENSMUST00000187303 640 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Fn1P11276 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.22□□□□□ -0.77
Fn1P11276 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Fn1P11276 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.22□□□□□ -0.77
Fn1P11276 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Fn1P11276 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Fn1P11276 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Fn1P11276 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Fn1P11276 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Fn1P11276 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Fn1P11276 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Fn1P11276 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Fn1P11276 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.78
Fn1P11276 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.21□□□□□ -0.78
Fn1P11276 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Fn1P11276 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Gm43752-201ENSMUST00000198475 697 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Gm17812-201ENSMUST00000204935 318 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Gm6722-201ENSMUST00000221586 390 ntBASIC10.21□□□□□ -0.78
Fn1P11276 AC140375.1-201ENSMUST00000225421 694 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Gm1821-202ENSMUST00000227415 750 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Fn1P11276 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.21□□□□□ -0.78
Fn1P11276 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Fn1P11276 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Fn1P11276 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.2□□□□□ -0.78
Fn1P11276 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Fn1P11276 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Fn1P11276 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Fn1P11276 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Fn1P11276 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Fn1P11276 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Fn1P11276 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.2□□□□□ -0.78
Fn1P11276 Gm25072-201ENSMUST00000175233 235 ntBASIC10.2□□□□□ -0.78
Fn1P11276 Gm9463-201ENSMUST00000206707 601 ntBASIC10.2□□□□□ -0.78
Fn1P11276 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Fn1P11276 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms