Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.97□□□□□ -0.49
P06344 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
P06344 Gm29608-201ENSMUST00000190444 463 ntBASIC11.97□□□□□ -0.49
P06344 Gm43433-201ENSMUST00000196573 481 ntBASIC11.97□□□□□ -0.49
P06344 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.97□□□□□ -0.49
P06344 Gm17794-201ENSMUST00000220252 955 ntBASIC11.97□□□□□ -0.49
P06344 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.97□□□□□ -0.49
P06344 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
P06344 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
P06344 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
P06344 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.97□□□□□ -0.49
P06344 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.96□□□□□ -0.49
P06344 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.96□□□□□ -0.49
P06344 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
P06344 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.96□□□□□ -0.49
P06344 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
P06344 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.96□□□□□ -0.49
P06344 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.96□□□□□ -0.49
P06344 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.96□□□□□ -0.49
P06344 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.96□□□□□ -0.49
P06344 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.96□□□□□ -0.49
P06344 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Gm7287-201ENSMUST00000205267 602 ntBASIC11.96□□□□□ -0.49
P06344 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.96□□□□□ -0.49
P06344 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.96□□□□□ -0.49
P06344 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.96□□□□□ -0.49
P06344 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
P06344 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06344 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
P06344 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
P06344 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
P06344 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.96□□□□□ -0.5
P06344 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.96□□□□□ -0.5
P06344 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
P06344 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06344 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.95□□□□□ -0.5
P06344 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.95□□□□□ -0.5
P06344 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.95□□□□□ -0.5
P06344 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.95□□□□□ -0.5
P06344 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.95□□□□□ -0.5
P06344 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.95□□□□□ -0.5
P06344 Gm12403-201ENSMUST00000121384 959 ntBASIC11.95□□□□□ -0.5
P06344 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.95□□□□□ -0.5
P06344 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
P06344 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
P06344 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.95□□□□□ -0.5
P06344 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms