Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.32■□□□□ 0.2
Cops6O88545 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.32■□□□□ 0.2
Cops6O88545 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.32■□□□□ 0.2
Cops6O88545 Gm13342-201ENSMUST00000121055 207 ntBASIC16.32■□□□□ 0.2
Cops6O88545 Gm12363-201ENSMUST00000122250 668 ntBASIC16.32■□□□□ 0.2
Cops6O88545 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Gm7584-201ENSMUST00000175829 940 ntBASIC16.32■□□□□ 0.2
Cops6O88545 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Gm28693-202ENSMUST00000190758 331 ntBASIC16.32■□□□□ 0.2
Cops6O88545 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.32■□□□□ 0.2
Cops6O88545 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Cops6O88545 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cops6O88545 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cops6O88545 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cops6O88545 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cops6O88545 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cops6O88545 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.31■□□□□ 0.2
Cops6O88545 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.31■□□□□ 0.2
Cops6O88545 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Gm13350-201ENSMUST00000120519 479 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.31■□□□□ 0.2
Cops6O88545 Gm7809-201ENSMUST00000153199 742 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Gm26185-201ENSMUST00000157692 266 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.31■□□□□ 0.2
Cops6O88545 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.31■□□□□ 0.2
Cops6O88545 Gm7783-201ENSMUST00000204795 781 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Gm9368-201ENSMUST00000219348 831 ntBASIC16.31■□□□□ 0.2
Cops6O88545 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cops6O88545 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cops6O88545 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cops6O88545 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cops6O88545 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cops6O88545 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cops6O88545 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cops6O88545 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cops6O88545 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.3■□□□□ 0.2
Cops6O88545 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Gm11978-201ENSMUST00000122315 466 ntBASIC16.3■□□□□ 0.2
Cops6O88545 Gm13786-201ENSMUST00000122371 333 ntBASIC16.3■□□□□ 0.2
Cops6O88545 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.3■□□□□ 0.2
Cops6O88545 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.3■□□□□ 0.2
Cops6O88545 Gm29396-201ENSMUST00000185659 716 ntBASIC16.3■□□□□ 0.2
Cops6O88545 Gm43758-201ENSMUST00000199500 367 ntBASIC16.3■□□□□ 0.2
Cops6O88545 Gm4768-201ENSMUST00000206199 686 ntBASIC16.3■□□□□ 0.2
Cops6O88545 Gm10608-202ENSMUST00000213924 676 ntBASIC16.3■□□□□ 0.2
Cops6O88545 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cops6O88545 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Cops6O88545 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cops6O88545 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cops6O88545 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms