Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pdlim1O70400 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim1O70400 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
Pdlim1O70400 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim1O70400 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pdlim1O70400 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim1O70400 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pdlim1O70400 Mir874-201ENSMUST00000104769 76 ntBASIC13.27□□□□□ -0.29
Pdlim1O70400 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.27□□□□□ -0.29
Pdlim1O70400 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pdlim1O70400 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Pdlim1O70400 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.27□□□□□ -0.29
Pdlim1O70400 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.27□□□□□ -0.29
Pdlim1O70400 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.27□□□□□ -0.29
Pdlim1O70400 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.27□□□□□ -0.29
Pdlim1O70400 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pdlim1O70400 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pdlim1O70400 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Pdlim1O70400 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.27□□□□□ -0.29
Pdlim1O70400 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim1O70400 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.26□□□□□ -0.29
Pdlim1O70400 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Gm15806-201ENSMUST00000120696 955 ntBASIC13.26□□□□□ -0.29
Pdlim1O70400 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pdlim1O70400 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.26□□□□□ -0.29
Pdlim1O70400 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.26□□□□□ -0.29
Pdlim1O70400 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pdlim1O70400 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pdlim1O70400 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim1O70400 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim1O70400 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim1O70400 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim1O70400 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim1O70400 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim1O70400 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim1O70400 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim1O70400 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms