Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf2O35218 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf2O35218 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cpsf2O35218 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm17837-201ENSMUST00000186435 985 ntBASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm10766-202ENSMUST00000194123 606 ntBASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf2O35218 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.39□□□□□ -0.11
Cpsf2O35218 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf2O35218 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.38□□□□□ -0.11
Cpsf2O35218 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cpsf2O35218 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cpsf2O35218 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.38□□□□□ -0.11
Cpsf2O35218 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gm4804-201ENSMUST00000182234 999 ntBASIC14.38□□□□□ -0.11
Cpsf2O35218 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpsf2O35218 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.38□□□□□ -0.11
Cpsf2O35218 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cpsf2O35218 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cpsf2O35218 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cpsf2O35218 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cpsf2O35218 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.38□□□□□ -0.11
Cpsf2O35218 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf2O35218 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cpsf2O35218 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.37□□□□□ -0.11
Cpsf2O35218 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Gm37935-201ENSMUST00000192012 982 ntBASIC14.37□□□□□ -0.11
Cpsf2O35218 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf2O35218 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf2O35218 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms