Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm11524-201ENSMUST00000119349 807 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm12403-201ENSMUST00000121384 959 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gm26464-201ENSMUST00000157094 305 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Auts2-212ENSMUST00000178555 309 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.92□□□□□ -0.5
Raet1aO08602 Gm44855-201ENSMUST00000205725 362 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.92□□□□□ -0.5
Raet1aO08602 Gm7730-201ENSMUST00000212486 454 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Gm6218-201ENSMUST00000219812 628 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.92□□□□□ -0.5
Raet1aO08602 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.92□□□□□ -0.5
Raet1aO08602 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.92□□□□□ -0.5
Raet1aO08602 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Raet1aO08602 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1aO08602 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.91□□□□□ -0.5
Raet1aO08602 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.91□□□□□ -0.5
Raet1aO08602 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Raet1aO08602 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Gm5354-201ENSMUST00000182417 973 ntBASIC11.91□□□□□ -0.5
Raet1aO08602 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.91□□□□□ -0.5
Raet1aO08602 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.91□□□□□ -0.5
Raet1aO08602 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.91□□□□□ -0.5
Raet1aO08602 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.91□□□□□ -0.5
Raet1aO08602 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.91□□□□□ -0.5
Raet1aO08602 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.91□□□□□ -0.5
Raet1aO08602 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Raet1aO08602 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1aO08602 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.91□□□□□ -0.5
Raet1aO08602 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.91□□□□□ -0.5
Raet1aO08602 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1aO08602 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.9□□□□□ -0.5
Raet1aO08602 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms