Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm13517-201ENSMUST00000120782 1495 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm15693-201ENSMUST00000120470 637 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm27622-201ENSMUST00000183779 60 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm10766-202ENSMUST00000194123 606 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm10253-201ENSMUST00000194270 940 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm46209-201ENSMUST00000217912 553 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 AC225888.1-201ENSMUST00000227184 728 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Gm13859-201ENSMUST00000119936 1423 ntBASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
C530025M09RikF6RGA8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm8410-201ENSMUST00000117225 605 ntBASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm15770-201ENSMUST00000117498 584 ntBASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm15393-201ENSMUST00000120499 219 ntBASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm24420-201ENSMUST00000176676 59 ntBASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Gm4804-201ENSMUST00000182234 999 ntBASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
C530025M09RikF6RGA8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms