Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Ighv1-70-201ENSMUST00000196509 351 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm24791-201ENSMUST00000104284 131 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm23596-201ENSMUST00000104304 132 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm44421-201ENSMUST00000205064 1221 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 AC154361.2-201ENSMUST00000224747 943 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm17213-201ENSMUST00000165161 1360 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm38344-201ENSMUST00000195306 1353 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm45592-201ENSMUST00000209605 1043 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 AC154572.1-201ENSMUST00000226098 1204 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm12030-201ENSMUST00000121917 223 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm15620-201ENSMUST00000122949 270 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Herc1E9PZP8 Gm5335-201ENSMUST00000182995 1000 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC7.27□□□□□ -1.25
Herc1E9PZP8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Nupl1-207ENSMUST00000225311 2475 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm14639-201ENSMUST00000120850 866 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm14993-201ENSMUST00000121180 164 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm21092-201ENSMUST00000178995 955 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm8731-201ENSMUST00000118088 412 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm8199-201ENSMUST00000121323 823 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm13981-201ENSMUST00000122360 447 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Kif4-ps-202ENSMUST00000185083 652 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC7.26□□□□□ -1.25
Herc1E9PZP8 Gm270-201ENSMUST00000223010 976 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 AC142266.1-201ENSMUST00000228107 415 ntBASIC7.26□□□□□ -1.25
Herc1E9PZP8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Herc1E9PZP8 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms