Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm12058-201ENSMUST00000118614 437 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm7003-201ENSMUST00000195089 312 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Mir339-201ENSMUST00000083659 96 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col4a6B1AVK5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col4a6B1AVK5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Gm18734-201ENSMUST00000172937 808 ntBASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Gm9555-201ENSMUST00000200908 583 ntBASIC13.51□□□□□ -0.25
Col4a6B1AVK5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col4a6B1AVK5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms