Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Terc-201ENSMUST00000082862 423 ntBASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cx3cr1Q9Z0D9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cr1Q9Z0D9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cr1Q9Z0D9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Cx3cr1Q9Z0D9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cx3cr1Q9Z0D9 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.14■□□□□ 0.49
Cx3cr1Q9Z0D9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cx3cr1Q9Z0D9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cx3cr1Q9Z0D9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cx3cr1Q9Z0D9 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.12■□□□□ 0.49
Cx3cr1Q9Z0D9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cx3cr1Q9Z0D9 Mir3960-201ENSMUST00000198213 73 ntBASIC18.12■□□□□ 0.49
Cx3cr1Q9Z0D9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cx3cr1Q9Z0D9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cx3cr1Q9Z0D9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cr1Q9Z0D9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cr1Q9Z0D9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cx3cr1Q9Z0D9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cx3cr1Q9Z0D9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cx3cr1Q9Z0D9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.09■□□□□ 0.49
Cx3cr1Q9Z0D9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cr1Q9Z0D9 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.09■□□□□ 0.49
Cx3cr1Q9Z0D9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cx3cr1Q9Z0D9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cx3cr1Q9Z0D9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cx3cr1Q9Z0D9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.09■□□□□ 0.49
Cx3cr1Q9Z0D9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cx3cr1Q9Z0D9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Cx3cr1Q9Z0D9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.08■□□□□ 0.49
Cx3cr1Q9Z0D9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cx3cr1Q9Z0D9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cx3cr1Q9Z0D9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cx3cr1Q9Z0D9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cr1Q9Z0D9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cr1Q9Z0D9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cr1Q9Z0D9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cr1Q9Z0D9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cx3cr1Q9Z0D9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cr1Q9Z0D9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cr1Q9Z0D9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cx3cr1Q9Z0D9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cx3cr1Q9Z0D9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cx3cr1Q9Z0D9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cr1Q9Z0D9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cr1Q9Z0D9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.04■□□□□ 0.48
Cx3cr1Q9Z0D9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cr1Q9Z0D9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Gm45364-201ENSMUST00000210883 159 ntBASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cr1Q9Z0D9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cr1Q9Z0D9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cr1Q9Z0D9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms