Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Msh4Q99MT2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msh4Q99MT2 Gm5921-201ENSMUST00000075898 882 ntBASIC20.79■□□□□ 0.92
Msh4Q99MT2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msh4Q99MT2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Msh4Q99MT2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msh4Q99MT2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.78■□□□□ 0.92
Msh4Q99MT2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Msh4Q99MT2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Msh4Q99MT2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msh4Q99MT2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.77■□□□□ 0.92
Msh4Q99MT2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Msh4Q99MT2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Msh4Q99MT2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh4Q99MT2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msh4Q99MT2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh4Q99MT2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh4Q99MT2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Msh4Q99MT2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Msh4Q99MT2 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.74■□□□□ 0.91
Msh4Q99MT2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.74■□□□□ 0.91
Msh4Q99MT2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh4Q99MT2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh4Q99MT2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Msh4Q99MT2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.73■□□□□ 0.91
Msh4Q99MT2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Msh4Q99MT2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh4Q99MT2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh4Q99MT2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Msh4Q99MT2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh4Q99MT2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh4Q99MT2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh4Q99MT2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh4Q99MT2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh4Q99MT2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Msh4Q99MT2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh4Q99MT2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.7■□□□□ 0.9
Msh4Q99MT2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh4Q99MT2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.7■□□□□ 0.9
Msh4Q99MT2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msh4Q99MT2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh4Q99MT2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh4Q99MT2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh4Q99MT2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.69■□□□□ 0.9
Msh4Q99MT2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh4Q99MT2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh4Q99MT2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh4Q99MT2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.68■□□□□ 0.9
Msh4Q99MT2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.68■□□□□ 0.9
Msh4Q99MT2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh4Q99MT2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh4Q99MT2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh4Q99MT2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh4Q99MT2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh4Q99MT2 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.66■□□□□ 0.9
Msh4Q99MT2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh4Q99MT2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms