Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Gm9812-201ENSMUST00000061934 968 ntBASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab40cQ8VHQ4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rab40cQ8VHQ4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rab40cQ8VHQ4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.46■□□□□ 0.39
Rab40cQ8VHQ4 Gm4799-201ENSMUST00000095396 657 ntBASIC17.46■□□□□ 0.39
Rab40cQ8VHQ4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rab40cQ8VHQ4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.46■□□□□ 0.39
Rab40cQ8VHQ4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rab40cQ8VHQ4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rab40cQ8VHQ4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab40cQ8VHQ4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab40cQ8VHQ4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab40cQ8VHQ4 Gm8503-201ENSMUST00000118131 455 ntBASIC17.45■□□□□ 0.38
Rab40cQ8VHQ4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab40cQ8VHQ4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab40cQ8VHQ4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab40cQ8VHQ4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab40cQ8VHQ4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Notumos-201ENSMUST00000151998 2659 ntBASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab40cQ8VHQ4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.42■□□□□ 0.38
Rab40cQ8VHQ4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab40cQ8VHQ4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab40cQ8VHQ4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.42■□□□□ 0.38
Rab40cQ8VHQ4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab40cQ8VHQ4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab40cQ8VHQ4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab40cQ8VHQ4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab40cQ8VHQ4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rab40cQ8VHQ4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.41■□□□□ 0.38
Rab40cQ8VHQ4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rab40cQ8VHQ4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab40cQ8VHQ4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab40cQ8VHQ4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab40cQ8VHQ4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Rab40cQ8VHQ4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rab40cQ8VHQ4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab40cQ8VHQ4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rab40cQ8VHQ4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.39■□□□□ 0.37
Rab40cQ8VHQ4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rab40cQ8VHQ4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab40cQ8VHQ4 Terc-201ENSMUST00000082862 423 ntBASIC17.38■□□□□ 0.37
Rab40cQ8VHQ4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab40cQ8VHQ4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab40cQ8VHQ4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab40cQ8VHQ4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab40cQ8VHQ4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab40cQ8VHQ4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab40cQ8VHQ4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.37■□□□□ 0.37
Rab40cQ8VHQ4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms