Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb7Q8CDY9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb7Q8CDY9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb7Q8CDY9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb7Q8CDY9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb7Q8CDY9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb7Q8CDY9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Gm12366-201ENSMUST00000121722 873 ntBASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Gm5786-201ENSMUST00000085368 882 ntBASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb7Q8CDY9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb7Q8CDY9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb7Q8CDY9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb7Q8CDY9 Gm22567-201ENSMUST00000175542 342 ntBASIC21.39■■□□□ 1.01
Pcdhb7Q8CDY9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdhb7Q8CDY9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdhb7Q8CDY9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhb7Q8CDY9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb7Q8CDY9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb7Q8CDY9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb7Q8CDY9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb7Q8CDY9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb7Q8CDY9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb7Q8CDY9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb7Q8CDY9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb7Q8CDY9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb7Q8CDY9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb7Q8CDY9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhb7Q8CDY9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcdhb7Q8CDY9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb7Q8CDY9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb7Q8CDY9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Pcdhb7Q8CDY9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.33■■□□□ 1.01
Pcdhb7Q8CDY9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb7Q8CDY9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb7Q8CDY9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb7Q8CDY9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb7Q8CDY9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb7Q8CDY9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Pcdhb7Q8CDY9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhb7Q8CDY9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhb7Q8CDY9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhb7Q8CDY9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhb7Q8CDY9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb7Q8CDY9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhb7Q8CDY9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb7Q8CDY9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb7Q8CDY9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb7Q8CDY9 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.31■■□□□ 1
Pcdhb7Q8CDY9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Pcdhb7Q8CDY9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb7Q8CDY9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb7Q8CDY9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb7Q8CDY9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms