Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.59■□□□□ 0.89
Trim36Q80WG7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Trim36Q80WG7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.59■□□□□ 0.89
Trim36Q80WG7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.59■□□□□ 0.89
Trim36Q80WG7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim36Q80WG7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim36Q80WG7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim36Q80WG7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Trim36Q80WG7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trim36Q80WG7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim36Q80WG7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim36Q80WG7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim36Q80WG7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim36Q80WG7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim36Q80WG7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim36Q80WG7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim36Q80WG7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim36Q80WG7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Trim36Q80WG7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim36Q80WG7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim36Q80WG7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim36Q80WG7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim36Q80WG7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Trim36Q80WG7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim36Q80WG7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim36Q80WG7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim36Q80WG7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim36Q80WG7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim36Q80WG7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim36Q80WG7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim36Q80WG7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim36Q80WG7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim36Q80WG7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim36Q80WG7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim36Q80WG7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim36Q80WG7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim36Q80WG7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim36Q80WG7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.51■□□□□ 0.87
Trim36Q80WG7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim36Q80WG7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trim36Q80WG7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim36Q80WG7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim36Q80WG7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trim36Q80WG7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Trim36Q80WG7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim36Q80WG7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim36Q80WG7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim36Q80WG7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim36Q80WG7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim36Q80WG7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim36Q80WG7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim36Q80WG7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim36Q80WG7 Gm22567-201ENSMUST00000175542 342 ntBASIC20.48■□□□□ 0.87
Trim36Q80WG7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim36Q80WG7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim36Q80WG7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim36Q80WG7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.47■□□□□ 0.87
Trim36Q80WG7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim36Q80WG7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim36Q80WG7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim36Q80WG7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms