Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chrna1P04756 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chrna1P04756 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.34■■□□□ 1.33
Chrna1P04756 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.34■■□□□ 1.33
Chrna1P04756 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.34■■□□□ 1.33
Chrna1P04756 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Chrna1P04756 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chrna1P04756 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chrna1P04756 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.33■■□□□ 1.33
Chrna1P04756 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Chrna1P04756 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chrna1P04756 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.32■■□□□ 1.32
Chrna1P04756 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chrna1P04756 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.32■■□□□ 1.32
Chrna1P04756 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chrna1P04756 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna1P04756 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna1P04756 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna1P04756 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna1P04756 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna1P04756 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.3■■□□□ 1.32
Chrna1P04756 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chrna1P04756 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.3■■□□□ 1.32
Chrna1P04756 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.29■■□□□ 1.32
Chrna1P04756 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chrna1P04756 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.29■■□□□ 1.32
Chrna1P04756 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chrna1P04756 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chrna1P04756 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chrna1P04756 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chrna1P04756 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chrna1P04756 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.28■■□□□ 1.32
Chrna1P04756 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chrna1P04756 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Chrna1P04756 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chrna1P04756 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
Chrna1P04756 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Chrna1P04756 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Chrna1P04756 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.26■■□□□ 1.31
Chrna1P04756 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.26■■□□□ 1.31
Chrna1P04756 Gm7417-201ENSMUST00000192950 473 ntBASIC23.26■■□□□ 1.31
Chrna1P04756 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chrna1P04756 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chrna1P04756 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.25■■□□□ 1.31
Chrna1P04756 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chrna1P04756 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chrna1P04756 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chrna1P04756 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Chrna1P04756 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.24■■□□□ 1.31
Chrna1P04756 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.24■■□□□ 1.31
Chrna1P04756 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
Chrna1P04756 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chrna1P04756 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Chrna1P04756 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Chrna1P04756 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Chrna1P04756 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Chrna1P04756 Gm40881-201ENSMUST00000223397 166 ntBASIC23.23■■□□□ 1.31
Chrna1P04756 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chrna1P04756 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chrna1P04756 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Chrna1P04756 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chrna1P04756 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.22■■□□□ 1.31
Chrna1P04756 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chrna1P04756 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.22■■□□□ 1.31
Chrna1P04756 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chrna1P04756 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chrna1P04756 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chrna1P04756 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Chrna1P04756 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chrna1P04756 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna1P04756 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
Chrna1P04756 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna1P04756 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.2■■□□□ 1.3
Chrna1P04756 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna1P04756 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.2■■□□□ 1.3
Chrna1P04756 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna1P04756 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna1P04756 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Chrna1P04756 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chrna1P04756 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chrna1P04756 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chrna1P04756 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chrna1P04756 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Chrna1P04756 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chrna1P04756 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.18■■□□□ 1.3
Chrna1P04756 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.18■■□□□ 1.3
Chrna1P04756 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chrna1P04756 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chrna1P04756 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chrna1P04756 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Chrna1P04756 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Chrna1P04756 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chrna1P04756 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms