Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm8652-201ENSMUST00000181363 964 ntBASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm8598-201ENSMUST00000221184 836 ntBASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm10012-201ENSMUST00000078252 192 ntBASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf3Q9QXK7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gm11814-201ENSMUST00000119515 929 ntBASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gm17150-201ENSMUST00000165577 381 ntBASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gm18187-201ENSMUST00000196476 984 ntBASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf3Q9QXK7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.42□□□□□ -0.1
Cpsf3Q9QXK7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms