Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmg20aQ9DC33 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmg20aQ9DC33 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Hmg20aQ9DC33 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Gm45747-201ENSMUST00000212203 999 ntBASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Gm15590-201ENSMUST00000078419 552 ntBASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmg20aQ9DC33 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm13884-201ENSMUST00000118103 829 ntBASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm27300-201ENSMUST00000184085 97 ntBASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm27335-201ENSMUST00000184758 97 ntBASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm37230-201ENSMUST00000194491 818 ntBASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm44719-201ENSMUST00000206404 149 ntBASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmg20aQ9DC33 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms