Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Mir698-201ENSMUST00000102164 109 ntBASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Gm15653-201ENSMUST00000119247 907 ntBASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Gm15393-201ENSMUST00000120499 219 ntBASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Gm13385-201ENSMUST00000121089 220 ntBASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp4cQ9D7F7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Gm25144-201ENSMUST00000179561 110 ntBASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Gm25352-201ENSMUST00000179815 110 ntBASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.1■□□□□ 0.17
Chmp4cQ9D7F7 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gm4875-201ENSMUST00000118257 786 ntBASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Chmp4cQ9D7F7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Chmp4cQ9D7F7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp4cQ9D7F7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp4cQ9D7F7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp4cQ9D7F7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp4cQ9D7F7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp4cQ9D7F7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp4cQ9D7F7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp4cQ9D7F7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chmp4cQ9D7F7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms