Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Gm4804-201ENSMUST00000182234 999 ntBASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Snf8Q9CZ28 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm15770-201ENSMUST00000117498 584 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm24420-201ENSMUST00000176676 59 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm9229-201ENSMUST00000222777 126 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.86□□□□□ -0.19
Snf8Q9CZ28 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snf8Q9CZ28 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Snf8Q9CZ28 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms