Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Gm11594-201ENSMUST00000122313 162 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Gm37714-201ENSMUST00000194742 342 ntBASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Gm45453-201ENSMUST00000211758 853 ntBASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim13Q9CYB0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gm4995-201ENSMUST00000117247 432 ntBASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gm17271-201ENSMUST00000165535 355 ntBASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gm37935-201ENSMUST00000192012 982 ntBASIC12.42□□□□□ -0.42
Trim13Q9CYB0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Gm45612-201ENSMUST00000211320 160 ntBASIC12.42□□□□□ -0.42
Trim13Q9CYB0 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.42□□□□□ -0.42
Trim13Q9CYB0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim13Q9CYB0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms