Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gm10146-201ENSMUST00000072739 309 ntBASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.45□□□□□ -0.26
Cstf1Q99LC2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm13786-201ENSMUST00000122371 333 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm16379-201ENSMUST00000161469 348 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm20482-202ENSMUST00000174729 825 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm8762-201ENSMUST00000193486 339 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm8227-201ENSMUST00000223306 571 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm26315-201ENSMUST00000083890 321 ntBASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf1Q99LC2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Rps4l-202ENSMUST00000204242 789 ntBASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Nsd1-205ENSMUST00000224693 852 ntBASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf1Q99LC2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms