Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.56□□□□□ -0.24
Cdk9Q99J95 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.56□□□□□ -0.24
Cdk9Q99J95 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 AA543401-201ENSMUST00000164248 1269 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm29310-201ENSMUST00000185468 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21825-201ENSMUST00000185728 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm29109-201ENSMUST00000185895 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21896-201ENSMUST00000186520 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21873-201ENSMUST00000186728 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21794-201ENSMUST00000187056 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21880-201ENSMUST00000187275 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21826-201ENSMUST00000187451 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21198-201ENSMUST00000188393 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21749-201ENSMUST00000189343 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21901-201ENSMUST00000189568 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm29424-201ENSMUST00000189716 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm28599-201ENSMUST00000189838 694 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21867-201ENSMUST00000189917 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm29269-201ENSMUST00000190087 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21722-201ENSMUST00000190153 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm28423-201ENSMUST00000190701 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21899-201ENSMUST00000190745 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21910-201ENSMUST00000191163 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21849-201ENSMUST00000191571 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm28678-201ENSMUST00000191593 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm29741-201ENSMUST00000192667 421 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm20910-201ENSMUST00000193268 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm21871-201ENSMUST00000194621 696 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.55□□□□□ -0.24
Cdk9Q99J95 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk9Q99J95 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Mir1895-201ENSMUST00000122615 79 ntBASIC13.54□□□□□ -0.24
Cdk9Q99J95 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gm26308-201ENSMUST00000157768 69 ntBASIC13.54□□□□□ -0.24
Cdk9Q99J95 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gm27494-201ENSMUST00000184735 189 ntBASIC13.54□□□□□ -0.24
Cdk9Q99J95 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gm45612-201ENSMUST00000211320 160 ntBASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Chchd1-203ENSMUST00000224633 557 ntBASIC13.54□□□□□ -0.24
Cdk9Q99J95 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdk9Q99J95 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms