Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb5Q91XZ5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Gm13342-201ENSMUST00000121055 207 ntBASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Gm6222-202ENSMUST00000182143 629 ntBASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Olfr284-202ENSMUST00000206647 966 ntBASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb5Q91XZ5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Gm13350-201ENSMUST00000120519 479 ntBASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Gm44364-201ENSMUST00000198368 141 ntBASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Gm9368-201ENSMUST00000219348 831 ntBASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdhb5Q91XZ5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Gm16479-201ENSMUST00000121706 932 ntBASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Gm7584-201ENSMUST00000175829 940 ntBASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Gm7783-201ENSMUST00000204795 781 ntBASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.77■□□□□ 0.12
Pcdhb5Q91XZ5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms