Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Gm18624-201ENSMUST00000220966 658 ntBASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhga4Q91XY4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Mir6392-201ENSMUST00000184924 108 ntBASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga4Q91XY4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhga4Q91XY4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Gm9794-201ENSMUST00000202370 423 ntBASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Gm44719-201ENSMUST00000206404 149 ntBASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms