Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.38□□□□□ -0.27
Retreg1dQ8VE91 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Gm15806-201ENSMUST00000120696 955 ntBASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retreg1dQ8VE91 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Gm19078-201ENSMUST00000206311 727 ntBASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retreg1dQ8VE91 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg1dQ8VE91 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms