Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smg8Q8VE18 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smg8Q8VE18 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smg8Q8VE18 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smg8Q8VE18 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smg8Q8VE18 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Gm44069-201ENSMUST00000204898 506 ntBASIC14.31□□□□□ -0.12
Smg8Q8VE18 Gm18054-201ENSMUST00000207539 555 ntBASIC14.31□□□□□ -0.12
Smg8Q8VE18 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.31□□□□□ -0.12
Smg8Q8VE18 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.31□□□□□ -0.12
Smg8Q8VE18 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.31□□□□□ -0.12
Smg8Q8VE18 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.3□□□□□ -0.12
Smg8Q8VE18 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Gm26927-201ENSMUST00000182385 965 ntBASIC14.3□□□□□ -0.12
Smg8Q8VE18 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Gm10268-201ENSMUST00000085340 555 ntBASIC14.3□□□□□ -0.12
Smg8Q8VE18 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smg8Q8VE18 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.29□□□□□ -0.12
Smg8Q8VE18 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.29□□□□□ -0.12
Smg8Q8VE18 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gm19309-201ENSMUST00000218295 205 ntBASIC14.29□□□□□ -0.12
Smg8Q8VE18 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.29□□□□□ -0.12
Smg8Q8VE18 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.29□□□□□ -0.12
Smg8Q8VE18 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smg8Q8VE18 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms