Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chmp7Q8R1T1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Gm6023-201ENSMUST00000118217 606 ntBASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Gm11637-201ENSMUST00000120601 592 ntBASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Gm6334-201ENSMUST00000207083 228 ntBASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.14■□□□□ 0.33
Chmp7Q8R1T1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm10608-202ENSMUST00000213924 676 ntBASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp7Q8R1T1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm11591-201ENSMUST00000120063 702 ntBASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm13786-201ENSMUST00000122371 333 ntBASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm26185-201ENSMUST00000157692 266 ntBASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm38241-201ENSMUST00000192641 898 ntBASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm38341-201ENSMUST00000195357 515 ntBASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm24526-201ENSMUST00000082921 158 ntBASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp7Q8R1T1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp7Q8R1T1 Gm19163-201ENSMUST00000223313 780 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms