Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Clip4Q8CI96 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm22189-201ENSMUST00000103822 86 ntBASIC13.58□□□□□ -0.24
Clip4Q8CI96 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm4804-201ENSMUST00000182234 999 ntBASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.58□□□□□ -0.24
Clip4Q8CI96 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm10766-202ENSMUST00000194123 606 ntBASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gm18027-201ENSMUST00000218947 619 ntBASIC13.58□□□□□ -0.24
Clip4Q8CI96 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.58□□□□□ -0.24
Clip4Q8CI96 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.58□□□□□ -0.24
Clip4Q8CI96 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clip4Q8CI96 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.57□□□□□ -0.24
Clip4Q8CI96 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Gm9797-201ENSMUST00000052902 613 ntBASIC13.57□□□□□ -0.24
Clip4Q8CI96 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clip4Q8CI96 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.56□□□□□ -0.24
Clip4Q8CI96 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Gm42612-201ENSMUST00000197986 623 ntBASIC13.56□□□□□ -0.24
Clip4Q8CI96 Gm43170-201ENSMUST00000199827 612 ntBASIC13.56□□□□□ -0.24
Clip4Q8CI96 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.56□□□□□ -0.24
Clip4Q8CI96 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.56□□□□□ -0.24
Clip4Q8CI96 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms