Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc87Q8CDL9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gm12151-201ENSMUST00000121374 290 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Mir1897-201ENSMUST00000122581 272 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gm27989-201ENSMUST00000184721 107 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Shd-206ENSMUST00000225145 998 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc87Q8CDL9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gm27306-201ENSMUST00000183970 107 ntBASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Dupd1-202ENSMUST00000224735 548 ntBASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.28□□□□□ -0.12
Ccdc87Q8CDL9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc87Q8CDL9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms