Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.74■□□□□ 0.11
Usp44Q8C2S0 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Itm2b-204ENSMUST00000228637 783 ntBASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Gm9794-201ENSMUST00000202370 423 ntBASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Gm18473-201ENSMUST00000220543 868 ntBASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp44Q8C2S0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Gm12490-201ENSMUST00000120255 560 ntBASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.72■□□□□ 0.11
Usp44Q8C2S0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Usp44Q8C2S0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms