Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf7Q8BTV2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gm5566-201ENSMUST00000116118 459 ntBASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gm6916-202ENSMUST00000205523 195 ntBASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf7Q8BTV2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Mir874-201ENSMUST00000104769 76 ntBASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Gm18049-201ENSMUST00000208909 581 ntBASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Pck2-205ENSMUST00000226352 2784 ntBASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf7Q8BTV2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf7Q8BTV2 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.47□□□□□ -0.25
Cpsf7Q8BTV2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cpsf7Q8BTV2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms