Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup54Q8BTS4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup54Q8BTS4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm11814-201ENSMUST00000119515 929 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm8652-201ENSMUST00000181363 964 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm8602-201ENSMUST00000184045 607 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup54Q8BTS4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.74□□□□□ -0.21
Nup54Q8BTS4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Gm5186-201ENSMUST00000218781 920 ntBASIC13.74□□□□□ -0.21
Nup54Q8BTS4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms