Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Gm6912-201ENSMUST00000117218 544 ntBASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Gm10766-202ENSMUST00000194123 606 ntBASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdhr3Q8BL00 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Mir449b-201ENSMUST00000104833 80 ntBASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.76□□□□□ -0.53
Cdhr3Q8BL00 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Gm15770-201ENSMUST00000117498 584 ntBASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdhr3Q8BL00 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdhr3Q8BL00 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdhr3Q8BL00 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms