Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Gm8410-201ENSMUST00000117225 605 ntBASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf38Q8BI21 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf38Q8BI21 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Gm9279-201ENSMUST00000223175 1606 ntBASIC13□□□□□ -0.33
Rnf38Q8BI21 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Gm6283-201ENSMUST00000182369 1000 ntBASIC13□□□□□ -0.33
Rnf38Q8BI21 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13□□□□□ -0.33
Rnf38Q8BI21 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Rnf38Q8BI21 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf38Q8BI21 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms