Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Matn2-203ENSMUST00000226766 3252 ntBASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Gm11452-201ENSMUST00000122376 690 ntBASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc5a7Q8BGY9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gm24589-201ENSMUST00000116692 94 ntBASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms