Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc116Q80X53 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc116Q80X53 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc116Q80X53 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc116Q80X53 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Gm27838-201ENSMUST00000184829 128 ntBASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Gm18041-201ENSMUST00000218210 618 ntBASIC13.2□□□□□ -0.3
Ccdc116Q80X53 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc116Q80X53 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm15376-201ENSMUST00000122258 783 ntBASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Mir7684-201ENSMUST00000183858 60 ntBASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm20445-201ENSMUST00000061905 565 ntBASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc116Q80X53 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Gm22189-201ENSMUST00000103822 86 ntBASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc116Q80X53 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms