Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 BC001981-202ENSMUST00000191393 1545 ntBASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm13342-201ENSMUST00000121055 207 ntBASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm24644-201ENSMUST00000157114 139 ntBASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Gm19184-201ENSMUST00000196798 928 ntBASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Gm43138-201ENSMUST00000199123 708 ntBASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Mir433-201ENSMUST00000093564 124 ntBASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38bQ80SY5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms