Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Gm17208-201ENSMUST00000168388 535 ntBASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx55Q6ZPL9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Gm12176-201ENSMUST00000121420 875 ntBASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx55Q6ZPL9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx55Q6ZPL9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.21■□□□□ 0.02
Ddx55Q6ZPL9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx55Q6ZPL9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Snord83b-201ENSMUST00000104546 94 ntBASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Gm31256-201ENSMUST00000194705 506 ntBASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.2■□□□□ 0.02
Ddx55Q6ZPL9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms