Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm16505-201ENSMUST00000179981 232 ntBASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm43138-201ENSMUST00000199123 708 ntBASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Rps4l-202ENSMUST00000204242 789 ntBASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Snrnp40Q6PE01 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm24548-201ENSMUST00000158650 108 ntBASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Snrnp40Q6PE01 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms