Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Gm27847-201ENSMUST00000183711 107 ntBASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Gm27375-201ENSMUST00000183799 107 ntBASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Gm38671-201ENSMUST00000200573 130 ntBASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Gm45841-201ENSMUST00000207700 164 ntBASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Gm6091-201ENSMUST00000098307 165 ntBASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgb4Q6P8W9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm11814-201ENSMUST00000119515 929 ntBASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Mir6420-201ENSMUST00000185032 102 ntBASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm6983-201ENSMUST00000214912 628 ntBASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgb4Q6P8W9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms