Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mir6546-201ENSMUST00000184460 62 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Gm37666-201ENSMUST00000194110 866 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Gm17889-201ENSMUST00000198410 598 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.43□□□□□ -0.42
AtmQ62388 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AtmQ62388 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Gm17208-201ENSMUST00000168388 535 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.43□□□□□ -0.42
AtmQ62388 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AtmQ62388 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
AtmQ62388 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Gm14109-201ENSMUST00000118814 309 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.43□□□□□ -0.42
AtmQ62388 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
AtmQ62388 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
AtmQ62388 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AtmQ62388 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.42□□□□□ -0.42
AtmQ62388 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.42□□□□□ -0.42
AtmQ62388 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
AtmQ62388 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
AtmQ62388 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Gm22121-201ENSMUST00000175148 54 ntBASIC12.42□□□□□ -0.42
AtmQ62388 Gm8913-201ENSMUST00000209491 641 ntBASIC12.42□□□□□ -0.42
AtmQ62388 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
AtmQ62388 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.42□□□□□ -0.42
AtmQ62388 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AtmQ62388 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
AtmQ62388 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
AtmQ62388 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.41□□□□□ -0.42
AtmQ62388 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.41□□□□□ -0.42
AtmQ62388 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
AtmQ62388 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.41□□□□□ -0.42
AtmQ62388 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
AtmQ62388 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
AtmQ62388 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
AtmQ62388 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Gm37246-201ENSMUST00000192665 835 ntBASIC12.41□□□□□ -0.42
AtmQ62388 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Gm14460-201ENSMUST00000121511 639 ntBASIC12.41□□□□□ -0.42
AtmQ62388 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.41□□□□□ -0.42
AtmQ62388 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.41□□□□□ -0.42
AtmQ62388 Gm19640-201ENSMUST00000214849 464 ntBASIC12.41□□□□□ -0.42
AtmQ62388 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.41□□□□□ -0.42
AtmQ62388 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AtmQ62388 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms