Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC153899.1-201ENSMUST00000214092 1117 ntBASIC10.06□□□□□ -0.8
Foxc1Q61572 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.06□□□□□ -0.8
Foxc1Q61572 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.06□□□□□ -0.8
Foxc1Q61572 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC10.06□□□□□ -0.8
Foxc1Q61572 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.05□□□□□ -0.8
Foxc1Q61572 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.05□□□□□ -0.8
Foxc1Q61572 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.05□□□□□ -0.8
Foxc1Q61572 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gm22588-201ENSMUST00000157510 140 ntBASIC10.05□□□□□ -0.8
Foxc1Q61572 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Foxc1Q61572 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.05□□□□□ -0.8
Foxc1Q61572 AC131743.3-201ENSMUST00000222099 662 ntBASIC10.05□□□□□ -0.8
Foxc1Q61572 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.05□□□□□ -0.8
Foxc1Q61572 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Foxc1Q61572 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Foxc1Q61572 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.05□□□□□ -0.8
Foxc1Q61572 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.04□□□□□ -0.8
Foxc1Q61572 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Foxc1Q61572 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Foxc1Q61572 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms