Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Gm14665-201ENSMUST00000122294 557 ntBASIC23.28■■□□□ 1.32
Trim41Q5NCC3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Gm18893-201ENSMUST00000198416 943 ntBASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Gm10146-201ENSMUST00000072739 309 ntBASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim41Q5NCC3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gm16397-201ENSMUST00000122201 494 ntBASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gm44545-201ENSMUST00000208262 746 ntBASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim41Q5NCC3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.31
Trim41Q5NCC3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Gm12217-201ENSMUST00000118858 696 ntBASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Gm44069-201ENSMUST00000204898 506 ntBASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim41Q5NCC3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm8706-201ENSMUST00000197372 1491 ntBASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm11439-201ENSMUST00000118598 409 ntBASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm6447-201ENSMUST00000118905 835 ntBASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm13123-201ENSMUST00000122173 492 ntBASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm13786-201ENSMUST00000122371 333 ntBASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim41Q5NCC3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim41Q5NCC3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trim41Q5NCC3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim41Q5NCC3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms