Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gm6415-201ENSMUST00000118488 348 ntBASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Fndc4Q3TR08 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Fndc4Q3TR08 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Fndc4Q3TR08 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms