Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhej1Q3KNJ2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Chchd1-203ENSMUST00000224633 557 ntBASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhej1Q3KNJ2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Rubie-203ENSMUST00000227803 2430 ntBASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Gm14822-201ENSMUST00000122247 291 ntBASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhej1Q3KNJ2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhej1Q3KNJ2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms