Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm12380-201ENSMUST00000119012 544 ntBASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm10774-201ENSMUST00000188689 204 ntBASIC11.92□□□□□ -0.5
Chd8Q09XV5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.92□□□□□ -0.5
Chd8Q09XV5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm3332-201ENSMUST00000189337 928 ntBASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm6450-201ENSMUST00000200896 574 ntBASIC11.92□□□□□ -0.5
Chd8Q09XV5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd8Q09XV5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm45481-201ENSMUST00000209717 877 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm15573-201ENSMUST00000119487 540 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm19009-201ENSMUST00000223072 823 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.91□□□□□ -0.5
Chd8Q09XV5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd8Q09XV5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm18201-201ENSMUST00000174735 875 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms