Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.54□□□□□ -0.08
Col9a2Q07643 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm45841-201ENSMUST00000207700 164 ntBASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.54□□□□□ -0.08
Col9a2Q07643 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.54□□□□□ -0.08
Col9a2Q07643 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm10268-201ENSMUST00000085340 555 ntBASIC14.54□□□□□ -0.08
Col9a2Q07643 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.54□□□□□ -0.08
Col9a2Q07643 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col9a2Q07643 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Col9a2Q07643 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm15198-201ENSMUST00000117283 177 ntBASIC14.53□□□□□ -0.08
Col9a2Q07643 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm9257-201ENSMUST00000221254 232 ntBASIC14.53□□□□□ -0.08
Col9a2Q07643 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Grk6-205ENSMUST00000224653 2976 ntBASIC14.53□□□□□ -0.08
Col9a2Q07643 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Col9a2Q07643 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.53□□□□□ -0.08
Col9a2Q07643 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col9a2Q07643 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.52□□□□□ -0.08
Col9a2Q07643 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col9a2Q07643 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.52□□□□□ -0.08
Col9a2Q07643 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.52□□□□□ -0.08
Col9a2Q07643 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Col9a2Q07643 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Col9a2Q07643 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col9a2Q07643 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col9a2Q07643 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.52□□□□□ -0.09
Col9a2Q07643 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.52□□□□□ -0.09
Col9a2Q07643 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Gm19184-201ENSMUST00000196798 928 ntBASIC14.52□□□□□ -0.09
Col9a2Q07643 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.52□□□□□ -0.09
Col9a2Q07643 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.52□□□□□ -0.09
Col9a2Q07643 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.52□□□□□ -0.09
Col9a2Q07643 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col9a2Q07643 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms