Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Gm28455-201ENSMUST00000189105 1290 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 BC037039-201ENSMUST00000192003 2205 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.26□□□□□ -0.29
Col9a1Q05722 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 AC154245.1-201ENSMUST00000224615 601 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 AC154730.1-201ENSMUST00000227874 816 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.26□□□□□ -0.29
Col9a1Q05722 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col9a1Q05722 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col9a1Q05722 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col9a1Q05722 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.25□□□□□ -0.29
Col9a1Q05722 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm13996-201ENSMUST00000118456 430 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm11980-201ENSMUST00000121445 986 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC13.25□□□□□ -0.29
Col9a1Q05722 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm22588-201ENSMUST00000157510 140 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.25□□□□□ -0.29
Col9a1Q05722 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm43550-201ENSMUST00000200597 303 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 AC168059.2-201ENSMUST00000224473 333 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm10076-201ENSMUST00000073238 384 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Mir483-201ENSMUST00000093631 73 ntBASIC13.25□□□□□ -0.29
Col9a1Q05722 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Col9a1Q05722 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col9a1Q05722 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms